Earth and Planetary Science

 Environmental Science, Policy, and Management

 

Banfield Laboratory

Latest bioRxiv Listings

Banfield Laboratory Contact Information

University of California, Berkeley

Earth and Planetary Sciences Department

Innovative Genomics Institute Building

2151 Berkeley Way

Berkeley, CA 94720-5230

Contact: Lily Law

Lab Manager

klaw4@berkeley.edu

Latest Publications

Groundwater Elusimicrobia are metabolically diverse compared to gut microbiome Elusimicrobia and some have a novel nitrogenase paralog

 

The rise of diversity in metabolic platforms across the Candidate Phyla Radiation

 

CRISPR-CasΦ from huge phages is a hypercompact genome editor

 

Bacterial Secondary Metabolite Biosynthetic Potential in Soil Varies with Phylum, Depth, and Vegetation Type

 

A scoutRNA Is Required for Some Type V CRISPR-Cas System

 

The distinction of CPR bacteria from other bacteria based on protein family content

 

Subsurface carbon monoxide oxidation capacity revealed through genome‐resolved metagenomics of a carboxydotroph

 

Clades of huge phages from across Earth’s ecosystems

 

Consistent Metagenome-Derived Metrics Verify and Delineate Bacterial Species Boundaries

 

Layer size polydispersity in hydrated montmorillonite creates multiscale porosity networks

 

Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow

 

Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut

 

Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria  

 

Accurate and complete genomes from metagenomes

 

Increased replication of dissimilatory nitrate-reducing bacteria leads to decreased anammox bioreactor performance

 

Niche differentiation is spatially and temporally regulated in the rhizosphere

 

Diverse Microorganisms in Sediment and Groundwater Are Implicated in Extracellular Redox Processes Based on Genomic Analysis of Bioanode Communities

 

 

 

 

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